Files in sagrudd/cDNA_tutorial
Tutorial For Nanopore Sequence Based Gene Expression Profiling
DESCRIPTION
NAMESPACE
R/CitationsAndBibliography.R
R/DifferentialGeneExpression.R
R/GeneExpressionFigures.R
R/SequenceCharacteristics.R
R/TutorialManifest.R
README.md
cDNA_deseq2/Analysis/StaticImages/ExperimentalDesign.png
cDNA_deseq2/Analysis/StaticImages/FolderLayout.png
cDNA_deseq2/Analysis/StaticImages/KnitIt.png
cDNA_deseq2/Analysis/StaticImages/dag1.png
cDNA_deseq2/Nanopore_cDNA_Tutorial.Rmd
cDNA_deseq2/R.dependencies
cDNA_deseq2/RawData/condition1_rep1.fastq.gz
cDNA_deseq2/RawData/condition1_rep2.fastq.gz
cDNA_deseq2/RawData/condition1_rep3.fastq.gz
cDNA_deseq2/RawData/condition2_rep1.fastq.gz
cDNA_deseq2/RawData/condition2_rep2.fastq.gz
cDNA_deseq2/RawData/condition2_rep3.fastq.gz
cDNA_deseq2/Snakefile
cDNA_deseq2/common.R
cDNA_deseq2/config.yaml
cDNA_tutorial.Rproj
inst/extdata/cdna_differential_expr_edger/Nanopore_cDNA_Tutorial.Rmd
inst/extdata/cdna_differential_expression/LeftOvers
inst/extdata/sequencing_statistics_qc/KnitIt.png
inst/extdata/sequencing_statistics_qc/Nanopore_SumStatQC_Tutorial.Rmd
inst/extdata/sequencing_statistics_qc/config.yaml
inst/extdata/sequencing_statistics_qc/merged_seq_summary.txt.bz2
inst/extdata/sequencing_statistics_qc/orphan_content
inst/extdata/sequencing_statistics_qc/sumstatEditParams.png
man/InitTutorial.Rd
man/candidateGeneExpressionBoxPlot.Rd
man/lcalc.Rd
man/md5sum.Rd
man/ncalc.Rd
man/pcaPlot.Rd
man/volcanoPlot.Rd
man/writeBibliography.Rd
