BuildColumnToProteinDataset: creates a column for the protein dataset after agregation by...
In samWieczorek/Dapar2: Tools for the Differential Analysis of Proteins Abundance with R
BuildColumnToProteinDataset R Documentation
creates a column for the protein dataset after agregation by
using the previous peptide dataset.
Description
This function creates a column for the protein dataset after aggregation
by using the previous peptide dataset.
Usage
BuildColumnToProteinDataset(peptideData, matAdj, columnName, proteinNames)
Arguments
peptideData
A data.frame of meta data of peptides. It is the fData
of the MSnset object.
matAdj
The adjacency matrix used to agregate the peptides data.
columnName
The name of the column in Biobase::fData(peptides_MSnset)
that the user wants to keep in the new protein data.frame.
proteinNames
The names of the protein in the new dataset
(i.e. rownames)
Value
A vector
Author(s)
Samuel Wieczorek
Examples
a <- 1
samWieczorek/Dapar2 documentation built on Oct. 12, 2023, 9:54 a.m.
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| BuildColumnToProteinDataset | R Documentation |
creates a column for the protein dataset after agregation by using the previous peptide dataset.
Description
This function creates a column for the protein dataset after aggregation by using the previous peptide dataset.
Usage
BuildColumnToProteinDataset(peptideData, matAdj, columnName, proteinNames)
Arguments
peptideData |
A data.frame of meta data of peptides. It is the fData of the MSnset object. |
matAdj |
The adjacency matrix used to agregate the peptides data. |
columnName |
The name of the column in Biobase::fData(peptides_MSnset) that the user wants to keep in the new protein data.frame. |
proteinNames |
The names of the protein in the new dataset (i.e. rownames) |
Value
A vector
Author(s)
Samuel Wieczorek
Examples
a <- 1
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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