get_beta_list: Creates CI matrix.

In samaperrin/JSAM: rap-around functions to help create a Joint Species Association Model through GRETA

Description

Creates matrix which shows beta effect confidence intervals for each parameter on each species.

Usage

get_beta_list(draws, beta_shared, beta_ssv, species_names, env_names,
  ssv = FALSE)

Arguments

draws	A set of mcmc draws produced by the GRETA function draws.
beta_shared	GRETA array of environmental parameters x species.
beta_ssv	GRETA array of species x species with species-speecific parameters defined along the diagonal. Not necessary if ssv=FALSE.
species_names	Names of species in data.
env_names	Names of environmental parameters.
ssv	Whether or not you are calculating species specific parameter values.

Value

A matrix with lower, mean and upper confidence intervals for beta effects of parmaeters on species presence/absence.

samaperrin/JSAM documentation built on June 16, 2020, 9:26 a.m.