Description Usage Arguments Details Value Examples
this function models each plant of a dataset using a regression to extract the slope (i.e. phyllocron: the rate of leaf appearance)
1  | fitReg(datain, trait, xtime, myylim, reference, myxlab)
 | 
datain | 
 input dataframe (wide format, as many columns as variables)  | 
trait | 
 variable to modelize (example visible_leaf, F_visible)  | 
xtime | 
 character, name of thermal time column in the input dataset (example thermaltime)  | 
myylim | 
 maximum value of y-axis for graphic  | 
reference | 
 character, a column name indicating an unique identifiant of plant (example: Ref == concatenation of experimentAlias-Line-Position-scenario)  | 
myxlab | 
 character, a x label for the output graphics  | 
the input dataset must contain a thermalTime column (numeric data) and a Ref column (unique id)
a list of two elements and the graphics of the regression
1: a dataframe of the predictions of the slope for each plant (phyllocron)
2: a list of fitted models for each plant for diagnostics purposes
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