outlierCARBayesST: outlierCARBayesST
In sanchezi/phisStatR: Phenoarch Greenhouse Data Analysis

Description Usage Arguments Value See Also Examples

a function to detect outlier point in time-course using a CARBayesST modelling

1	outlierCARBayesST(modelin, datain, threshold, trait)

`modelin`	a CARBayesST object
`datain`	input dataframe of parameters used in the CARBayesST modelling
`threshold,`	numeric threshold for influence with standardized residuals
`trait,`	character, trait of interest to model (example plantHeight...)

a plot of fitted vs. residuals and a dataset with a column identifying the outlier points

CARBayesST, ST.CARanova

 test<-fitCARBayesST(datain=mydata,xvar="thermalTime",trait="plantHeight",k=2,
     graphDist=TRUE,burnin=10,n.sample=110,
     formulaModel=as.formula(plantHeight~scenario+genotypeAlias),
     typeModel="anova",verbose=FALSE)
 test2<-outlierCARBayesST(modelin=test[[1]],datain=test[[2]],threshold=4,trait="plantHeight")