search_flora: Searches in the List of Species of the Brazilian Flora 2020...

In saramortara/rocc: Workflows for biodiversity data download and cleaning

Searches in the List of Species of the Brazilian Flora 2020 database

Description

Returns species scientific name lists from phytogeographic domain, state, life form and/or endemism status from the List of Species of the Brazilian Flora 2020 database

Usage

search_flora(
  domain = NULL,
  stateProvince = NULL,
  life_form = NULL,
  habitat = NULL,
  vegetation_type = NULL,
  endemism = NULL,
  ...
)

Arguments

domain	a domain in Mata Atlântica, Cerrado, Pantanal, Pampa, Amazônia
stateProvince	Two-letter code for Brazilian states (e.g. "MA")
life_form	character, search species with the following life forms
habitat	character, search species in the habitat options according to the FB2020
vegetation_type	character, filter by vegetation type according to the FB2020
endemism	logical, return species that are endemic or not from Brazil Defaults to NULL to return all species
...	'update_flora()' parameters: 'update_force = TRUE' deletes the file on cache, 'manual = TRUE' indicates the update will be manual, from a file hosted at 'zip_path'

Value

a data frame with taxon IDs, scientific name and binomial name without authors

Author(s)

Andrea Sánchez-Tapia & Sara Mortara

Examples

# All endemic species from the caatinga in Pernambuco
## Not run: 
search_flora(domain = "Caatinga",
             state = "PE",
             endemism = TRUE)

## End(Not run)

saramortara/rocc documentation built on April 3, 2022, 3:41 p.m.