Files in saschajung/Intercom
Reconstruction of Functional Cell-Cell Communication Networks
DESCRIPTION
InterCom_R_package.Rproj
LICENSE.md
NAMESPACE
R/auxFuncs.R
R/data.R
R/main.R
R/mainlib.R
R/sysdata.rda
README.md
data-raw/HUMAN_Background_data_raw.RData
data-raw/TFs_Mouse_AnimalTFDB.txt
data-raw/process.R
data-raw/uniprot-filtered-organism-HSA.tab
data/HUMAN_Background_signaling_interactome.rda
data/HUMAN_LR.rda
data/HUMAN_Ligands.rda
data/HUMAN_Receptors.rda
data/HUMAN_TF_TF_interactions.rda
data/HUMAN_dummy.var.rda
data/HUMAN_intermediates.rda
data/HUMAN_non_interface_TFs.rda
data/HUMAN_tf.db.rda
data/HUMAN_tfs.rda
data/MOUSE_Background_signaling_interactome.rda
data/MOUSE_LR.rda
data/MOUSE_Ligands.rda
data/MOUSE_Receptors.rda
data/MOUSE_TF_TF_interactions.rda
data/MOUSE_dummy.var.rda
data/MOUSE_intermediates.rda
data/MOUSE_non_interface_TFs.rda
data/MOUSE_tf.db.rda
data/MOUSE_tfs.rda
man/Background_signaling_interactome.Rd
man/Data_preprocessing.Rd
man/HUMAN_Background_signaling_interactome.Rd
man/HUMAN_LR.Rd
man/HUMAN_Ligands.Rd
man/HUMAN_Receptors.Rd
man/HUMAN_TF_TF_interactions.Rd
man/HUMAN_dummy.var.Rd
man/HUMAN_intermediates.Rd
man/HUMAN_non_interface_TFs.Rd
man/HUMAN_tf.db.Rd
man/HUMAN_tfs.Rd
man/InterCom.Rd
man/LR.Rd
man/Ligands.Rd
man/MOUSE_Background_signaling_interactome.Rd
man/MOUSE_LR.Rd
man/MOUSE_Ligands.Rd
man/MOUSE_Receptors.Rd
man/MOUSE_TF_TF_interactions.Rd
man/MOUSE_dummy.var.Rd
man/MOUSE_intermediates.Rd
man/MOUSE_non_interface_TFs.Rd
man/MOUSE_tf.db.Rd
man/MOUSE_tfs.Rd
man/Markov_chain_stationary_distribution.Rd
man/Receptors.Rd
man/SigHotSpotter_pipeline.Rd
man/TF_TF_interactions.Rd
man/bool.data.Rd
man/comp_score_tf.Rd
man/compatability_score.Rd
man/dummy.var.Rd
man/gene.coexp.Rd
man/get.cons.tfs.Rd
man/get.gene.expr.Rd
man/high_probability_intermediates.Rd
man/integrate_sig_TF.Rd
man/intermediates.Rd
man/non_interface_TFs.Rd
man/path.prob.sum.Rd
man/product_path_weight.Rd
man/reproduceNetworks.Rd
man/scoringFun.Rd
man/spcal_path_weight.Rd
man/tf.db.Rd
man/tfs.Rd
man/up_down_tfs.Rd
man/weight_probability.Rd
