Files in saskiaotto/INDperform

Evaluation of Indicator Performances for Assessing Ecosystem States

.DS_Store

.Rbuildignore

.github/.gitignore

.github/workflows/check-full.yaml

.gitignore

DESCRIPTION

INDperform.Rproj

NAMESPACE

NEWS.md R/INDperform.R R/approx_deriv.R R/calc_deriv.R R/calc_nrmse.R R/calc_pred.R R/check_ind_press.R R/check_input_tbl.R R/check_input_vec.R R/clust_sc.R R/compare_thresholds.R R/cond_boot.R R/cooks_dist_gamm.R R/data.R R/dist_sc.R R/dist_sc_group.R R/expect_resp.R R/find_id.R R/get_signif_code.R R/get_sum_output.R R/helper_plot_diagnostics.R R/helper_plot_model.R R/helper_plot_spiechart.R R/ind_init.R R/is_value.R R/loocv_thresh_gam.R R/merge_models.R R/model_gam.R R/model_gamm.R R/model_trend.R R/nrmse.R R/pipe.R R/place_text.R R/plot_clust_sc.R R/plot_diagnostics.R R/plot_model.R R/plot_spiechart.R R/plot_statespace_ch.R R/plot_statespace_ed.R R/plot_trend.R R/scoring.R R/select_interaction.R R/select_model.R R/sort_output_tbl.R R/statespace_ch.R R/statespace_ed.R R/summary_sc.R R/test_interaction.R R/test_tac.R R/thresh_gam.R README.Rmd README.md

_pkgdown.yml

cran-comments.md data-raw/crit_scores_tmpl.R data-raw/example_output_data.R data-raw/ind_ex.R

data-raw/ind_ex.csv

data-raw/press_ex.R

data-raw/press_ex.csv

data-raw/press_type_ex.R

data/all_results_ex.rda

data/crit_scores_tmpl.rda

data/ind_ex.rda

data/ind_init_ex.rda

data/merge_models_ex.rda

data/model_gam_ex.rda

data/model_gamm_ex.rda

data/model_trend_ex.rda

data/press_ex.rda

data/press_type_ex.rda

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docs/reference/calc_pred.html

docs/reference/check_ind_press.html

docs/reference/check_input_tbl.html

docs/reference/check_input_vec.html

docs/reference/clust_sc.html

docs/reference/compare_thresholds.html

docs/reference/cond_boot.html

docs/reference/cooks_dist_gamm.html

docs/reference/crit_scores_tmpl.html

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docs/reference/find_id.html

docs/reference/get_signif_code.html

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docs/reference/ind_ex.html

docs/reference/ind_init.html

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docs/sitemap.xml

index.Rmd index.md

inst/extdata/CritScoreTable.csv

man/.DS_Store

man/.Rapp.history

man/INDperform-package.Rd man/all_results_ex.Rd man/approx_deriv.Rd man/calc_deriv.Rd man/calc_nrmse.Rd man/calc_pred.Rd man/check_ind_press.Rd man/check_input_tbl.Rd man/check_input_vec.Rd man/clust_sc.Rd man/compare_thresholds.Rd man/cond_boot.Rd man/cooks_dist_gamm.Rd man/crit_scores_tmpl.Rd man/dist_sc.Rd man/dist_sc_group.Rd man/expect_resp.Rd

man/figures/INDperform_cheatsheet.png

man/figures/README_spiechart.png

man/figures/logo.png

man/figures/mds_logo_text_144dpi.png

man/figures/shiny_app_expect_resp.png

man/find_id.Rd man/get_signif_code.Rd man/get_sum_output.Rd man/ind_ex.Rd man/ind_init.Rd man/ind_init_ex.Rd man/is_value.Rd man/loocv_thresh_gam.Rd man/merge_models.Rd man/merge_models_ex.Rd man/model_gam.Rd man/model_gam_ex.Rd man/model_gamm.Rd man/model_gamm_ex.Rd man/model_trend.Rd man/model_trend_ex.Rd man/nrmse.Rd man/pipe.Rd man/place_text.Rd man/plot_clust_sc.Rd man/plot_diagnostics.Rd man/plot_model.Rd man/plot_outline.Rd man/plot_spie.Rd man/plot_spiechart.Rd man/plot_statespace_ch.Rd man/plot_statespace_ed.Rd man/plot_thresh.Rd man/plot_trend.Rd man/press_ex.Rd man/press_type_ex.Rd man/scoring.Rd man/select_interaction.Rd man/select_model.Rd man/sort_output_tbl.Rd man/statespace_ch.Rd man/statespace_ed.Rd man/summary_sc.Rd man/test_interaction.Rd man/test_tac.Rd man/thresh_gam.Rd

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tests/figs/deps.txt

tests/figs/test-plots/diagnostic-plots-plot-cook.svg

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tests/figs/test-plots/diagnostic-plots-plot-qq.svg

tests/figs/test-plots/diagnostic-plots-plot-resid.svg

tests/figs/test-plots/diagnostic-plots-plot-tac.svg

tests/figs/test-plots/plot-clust-sc.svg

tests/figs/test-plots/plot-model-plot-derivatives.svg

tests/figs/test-plots/plot-model-plot-predict.svg

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tests/testthat.R tests/testthat/Rplots.pdf tests/testthat/test_approx_deriv.R tests/testthat/test_calc_deriv.R tests/testthat/test_calc_nrmse.R tests/testthat/test_calc_pred.R tests/testthat/test_check_ind_press.R tests/testthat/test_check_input_tbl.R tests/testthat/test_check_input_vec.R tests/testthat/test_clust_sc.R tests/testthat/test_compare_thresholds.R tests/testthat/test_cond_boot.R tests/testthat/test_cooks_dist_gamm.R tests/testthat/test_dist_sc.R tests/testthat/test_dist_sc_group.R tests/testthat/test_find_id.R tests/testthat/test_get_signif_code.R tests/testthat/test_get_sum_output.R tests/testthat/test_ind_init.R tests/testthat/test_is_value.R tests/testthat/test_loocv_thresh_gam.R tests/testthat/test_merge_models.R tests/testthat/test_model_gam.R tests/testthat/test_model_gamm.R tests/testthat/test_model_trend.R tests/testthat/test_nrmse.R tests/testthat/test_place_text.R tests/testthat/test_plot_clust_sc.R tests/testthat/test_plot_diagnostics.R tests/testthat/test_plot_model.R tests/testthat/test_plot_spiechart.R tests/testthat/test_plot_statespace_ch.R tests/testthat/test_plot_statespace_ed.R tests/testthat/test_plot_trend.R tests/testthat/test_plots.R tests/testthat/test_scoring.R tests/testthat/test_select_interaction.R tests/testthat/test_select_model.R tests/testthat/test_sort_output_tbl.R tests/testthat/test_statespace_ch.R tests/testthat/test_statespace_ed.R tests/testthat/test_summary_sc.R tests/testthat/test_test_interaction.R tests/testthat/test_test_tac.R tests/testthat/test_thresh_gam.R

saskiaotto/INDperform documentation built on Oct. 27, 2021, 10:33 p.m.