Files in sbfnk/dynmod
Dynamic models
.gitignore
DESCRIPTION
Doxyfile
Makefile
Makefile.cluster
Makefile.della
Makefile.imac
Makefile.macbook
NAMESPACE
R/RcppExports.R
R/cpx_fit_external.r
R/cpx_ms_age.R
R/load_data.R
R/plot_data.R
R/polymod.R
R/rcpp_tsir.R
R/run_tsir.R
R/seir.R
R/susceptibility.R
R/time_series.R
R/tsir.R
R/utilities.R
R/wallinga.R
man/age.distribution.Rd
man/age.likelihood.Rd
man/agegroups.to.limits.Rd
man/backcalc.population.Rd
man/brownian.Rd
man/clean_countries.Rd
man/combine.compartments.Rd
man/cpx.age.wallinga.Rd
man/cpx.init.prior.Rd
man/cpx.prior.Rd
man/df_to_ts.Rd
man/endemic.age.dist.Rd
man/epidemic.age.dist.Rd
man/estimate.immunity.mmr.Rd
man/estimate.uptake.mmr.Rd
man/estimateMMRImmunity.Rd
man/fit.chickenpox.wallinga.Rd
man/fit.measles.wallinga.Rd
man/fit.polymod.Rd
man/forward.initial.conditions.Rd
man/gen.init.Rd
man/homogeneous.mixing.matrix.Rd
man/initSIR.Rd
man/interpolate.serology.Rd
man/limits.to.agegroups.Rd
man/loadBryanData.Rd
man/loadChickenpoxEWAge.Rd
man/loadChickenpoxSerology.Rd
man/loadCopenhagenDisease.Rd
man/loadDemographicsEW.Rd
man/loadEuropeanMaps.Rd
man/loadMMREW.Rd
man/loadMMREuropeTimings.Rd
man/loadMMRWorld.Rd
man/loadMeaslesEWAge.Rd
man/loadMeaslesEWConfirmation.Rd
man/loadMeaslesEurope.Rd
man/loadMeaslesSerology.Rd
man/loadMeaslesSerologyFine1950.Rd
man/loadMeaslesWHO.Rd
man/loadPolymod.Rd
man/loadPopulationEWAge.Rd
man/loadPopulationEurope.Rd
man/loadPopulationWorldAge.Rd
man/loadRVCVaccinationData.Rd
man/loadSIAData.Rd
man/loadWorldMeaslesData.Rd
man/loadWorldPopulationProspectData.Rd
man/lower.to.upper.limits.Rd
man/melt.trajectory.Rd
man/ms.age.structure.wallinga.Rd
man/ms.prior.Rd
man/pad.zeroes.Rd
man/piecewise.linear.Rd
man/plot.model.data.Rd
man/plot.sampled.run.Rd
man/plotChickenpoxEWBeforeAfterRatios.Rd
man/plotChickenpoxEWData.Rd
man/plotChickenpoxSerology.Rd
man/plotDemographicEWData.Rd
man/plotMMRData.Rd
man/plotMSCPXEWData.Rd
man/plotMeaslesEWConfData.Rd
man/plotMeaslesEWData.Rd
man/plotMeaslesEuropeanMaps.Rd
man/plotMeaslesSerology.Rd
man/plotMeaslesWHOData.Rd
man/plot_mixing_vacc_ages.Rd
man/pop.parameters.Rd
man/rcpp_hello_world.Rd
man/runSIR.Rd
man/sample.init.Rd
man/sample.posterior.Rd
man/sample.prior.Rd
man/scan.age.dist.Rd
man/seir.mcmc.Rd
man/seir.stochastic.Rd
man/tsir-package.Rd
man/year.week.to.date.Rd
src/.Rhistory
src/Makevars
src/Makevars.cluster
src/Makevars.della
src/Makevars.imac
src/Makevars.macbook
src/Makevars.win
src/RcppExports.cpp
src/city_calculator.cpp
src/city_calculator.hpp
src/demo.c
src/getseed.cpp
src/getseed.hpp
src/gravity_model.cpp
src/gravity_model.hpp
src/param_container.cpp
src/param_container.hpp
src/parameter.hpp
src/pearson.cpp
src/pearson.hpp
src/rcpp_tsir.cpp
src/rcpp_tsir.hpp
src/seir.c
src/simulation.cpp
src/simulation.hpp
src/tsir.cpp
src/utilities.c
src/utilities.h
