sample.posterior: Take random samples from the posterior
In sbfnk/dynmod: Dynamic models

Description Usage Arguments Value Author(s)

Take random samples from the posterior

sample.posterior(sample.prior, eval.prior, gen.init, data, test.init = NULL,
  fixed.parameters = list(), likelihood.arguments = list(),
  mcmc.arguments = list(), time.column = "time", tmax = NULL,
  thickening = 1, interpolate = T, nSamples = 1, update.init = F)

`sample.prior`	a function to sample from prior
`eval.prior`	a function to evaluate the prior
`gen.init`	a function to generate the initial conditions
`data`	the data to compare the model to
`test.init`	initial conditions (proportoin susceptible in each each group)
`fixed.parameters`	(list of) fixed parameters of the model
`likelihood.arguments`	(list of) parameters to be passed to age.likelihood
`mcmc.arguments`	(list of) parameters to be passed to mcmcMH
`time.column`	the name of the time column in the data
`tmax`	maximum time to run the simulations for
`thickening`	thickening innterval
`interpolate`	whether to intepolate births/deaths etc
`nSamples`	number of samples (if this is 1, the sample will be from the prior)
`update.init`	whether to update the initial conditions
`return.traj`	whether to return the whol trajectory