get_kinativ: Retrieve KiNativ assay data, percent inhibition or ic50.

Description Usage Arguments Value Examples

View source: R/get_kinativ.R

Description

Retrieve KiNativ assay data, percent inhibition or ic50.

Usage

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get_kinativ(level = "perc_inhib", cells = "all", proteins = "all",
  perturbagens = "all", perturbagen_dose = "all")

Arguments

level

string equal to "perc_inhib" or "ic50" for percent inhibition or ic50 data respectively (default "perc_inhib")

proteins

vector of strings with protein names (Default "all")

perturbagens

vector of strings with perturbagens IDs (Default "all")

perturbagen_dose

numeric vector with perturbagen doses (Default "all")

Value

data frame containing entity selected and the associated percent inhibition or ic50 data

Examples

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get_kinativ(level="perc_inhib")
get_kinativ(level="ic50",proteins="BRAF")
get_kinativ(perturbagens = "10231-101-1")

schurerlab/LINCSanalytics documentation built on Jan. 30, 2018, 1:15 a.m.