extractMS1and2.RMBarchive: Extract MS1 and MS2 Peaklists from RMassBank Archive
In schymane/ReSOLUTION: SOLUTIONS for High ReSOLUTION Mass Spectrometry
Description
Usage
Arguments
Details
Value
Author(s)
See Also
View source: R/MS1_functions.R
Description
This extracts the "raw" MS1 data and the processed MS2 data
from a RMassBank archive file
and saves the corresponding files in the given directories. In contrast
to extractMS1.RMBarchive, this only saves data where MS2 were found.
Usage
1
extractMS1and2.RMBarchive(RMBarchive, MS1_dir, MS2_dir)
Arguments
RMBarchive
Archive file to process
MS1_dir
Directory in which to save the MS1 files
MS2_dir
Directory in which to save the MS2 files
Details
Note that this function could be extended to improve the MS2 export.
The current state is very basic.
Value
Returns nothing; files are saved externally.
Author(s)
Emma Schymanski <emma.schymanski@uni.lu>
See Also
msmsWorkflow, extractMS1.RMBarchive.
schymane/ReSOLUTION documentation built on May 22, 2021, 3:41 a.m.
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Description Usage Arguments Details Value Author(s) See Also
View source: R/MS1_functions.R
Description
This extracts the "raw" MS1 data and the processed MS2 data
from a RMassBank archive file
and saves the corresponding files in the given directories. In contrast
to extractMS1.RMBarchive, this only saves data where MS2 were found.
Usage
1 | extractMS1and2.RMBarchive(RMBarchive, MS1_dir, MS2_dir)
|
Arguments
RMBarchive |
Archive file to process |
MS1_dir |
Directory in which to save the MS1 files |
MS2_dir |
Directory in which to save the MS2 files |
Details
Note that this function could be extended to improve the MS2 export. The current state is very basic.
Value
Returns nothing; files are saved externally.
Author(s)
Emma Schymanski <emma.schymanski@uni.lu>
See Also
msmsWorkflow, extractMS1.RMBarchive.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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