extractMS1and2.RMBarchive: Extract MS1 and MS2 Peaklists from RMassBank Archive
Description Usage Arguments Details Value Author(s) See Also
View source: R/MS1_functions.R
Description
This extracts the "raw" MS1 data and the processed MS2 data
from a RMassBank archive file
and saves the corresponding files in the given directories. In contrast
to extractMS1.RMBarchive, this only saves data where MS2 were found.
Usage
1 | extractMS1and2.RMBarchive(RMBarchive, MS1_dir, MS2_dir)
|
Arguments
RMBarchive |
Archive file to process |
MS1_dir |
Directory in which to save the MS1 files |
MS2_dir |
Directory in which to save the MS2 files |
Details
Note that this function could be extended to improve the MS2 export. The current state is very basic.
Value
Returns nothing; files are saved externally.
Author(s)
Emma Schymanski <emma.schymanski@uni.lu>
See Also
msmsWorkflow, extractMS1.RMBarchive.
