read_dict: Read dictionary

In sean-cho/toolkit: Toolkit for data manipulation and plotting.

Description

read_dict Read .dict files generated using Picard tools as seqinfo objects.

Usage

read_dict(dict, genome = "hs37d5")

Arguments

dict	.dict file containing reference information to read.
genome	Genome name. ['hs37d5']

Details

Reads an input .dict file as a seqinfo object to be used in GenomicRanges.

Value

A seqinfo object to be used with GenomicRanges.

Examples

x1 <- matrix(rnorm(1000), nrow = 50)
rownames(x1) = paste('LowSD', 1:50, sep='_')
x2 <- matrix(rnorm(1000, sd = 3), nrow = 50)
rownames(x2) = paste('HighSD', 1:50, sep='_')
dpsd(rbind(x1,x2),20)

sean-cho/toolkit documentation built on May 29, 2019, 4:24 p.m.