get_janeway_alterations: load Janeway alterations

In seandavi/TargetOsteoAnalysis: Access Open-access TARGET Osteosarcoma Data

Description

The data from Proceedings of the National Academy of Sciences Dec 2014, 111 (51) E5564-E5573 are available in what looks to be a relatively complete table that includes SNVs, SNPs, as well as copy number variation. This function just loads those data for convenience. It is likely that further filtering is going to be required before use.

Usage

get_janeway_alterations()

Value

a tibble

References

Data from https://www.pnas.org/highwire/filestream/618044/field_highwire_adjunct_files/7/pnas.1419260111.sd08.xlsx. See Proceedings of the National Academy of Sciences Dec 2014, 111 (51) E5564-E5573; DOI: 10.1073/pnas.1419260111.

Examples

alts = get_janeway_alterations()
head(alts)
colnames(alts)

seandavi/TargetOsteoAnalysis documentation built on May 22, 2020, 8:23 p.m.