as.json-VCF-method: Convert VCF object to json
In seandavi/VCFWrenchR: VCF file utilities
Description
This method converts an VCF to a JSON string.
Usage
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## S4 method for signature 'VCF'
as.json(x, ...)
Examples
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require(VariantAnnotation)
vcffile = system.file(package='VariantAnnotation',path='extdata/chr22.vcf.gz')
v = readVcf(vcffile,'hg19')
as.json(head(v,3),pretty=TRUE)
seandavi/VCFWrenchR documentation built on May 29, 2019, 4:53 p.m.
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Description
This method converts an VCF to a JSON string.
Usage
1 2 | ## S4 method for signature 'VCF'
as.json(x, ...)
|
Examples
1 2 3 4 | require(VariantAnnotation)
vcffile = system.file(package='VariantAnnotation',path='extdata/chr22.vcf.gz')
v = readVcf(vcffile,'hg19')
as.json(head(v,3),pretty=TRUE)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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