as.data.frame-ExpandedVCF-method: Convert ExpandedVCF to data.frame

Description Usage Examples

Description

This method converts an ExpandedVCF to a data.frame.

Usage

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## S4 method for signature 'ExpandedVCF'
as.data.frame(x, row.names = NULL, optional = FALSE,
  ...)

Examples

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require(VariantAnnotation)
vcffile = system.file(package='VariantAnnotation',path='extdata/chr22.vcf.gz')
v = readVcf(vcffile,'hg19')
ve = expand(v)
class(ve)
head(as.data.frame(v))

seandavi/VCFWrenchR documentation built on Feb. 19, 2018, 2:06 a.m.