plotSampleIntensities: Plot the sample intensities.
In seandavi/methylumi: Handle Illumina methylation data
Description
Usage
Arguments
Examples
Description
The Illumina methylation platforms all show a significant dye bias. The
plotSampleIntensities method shows the density plots for the two channels
allowing direct visualization of the effect.
Usage
1
plotSampleIntensities(x,beta.cuts,s)
Arguments
x
an object of class MethyLumi or a subclass
beta.cuts
cutoffs for low and high beta values
s
sample number to plot
Examples
1
2
data(mldat)
plotSampleIntensities(mldat,s=1)
seandavi/methylumi documentation built on Oct. 28, 2021, 12:42 a.m.
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Description Usage Arguments Examples
Description
The Illumina methylation platforms all show a significant dye bias. The plotSampleIntensities method shows the density plots for the two channels allowing direct visualization of the effect.
Usage
1 | plotSampleIntensities(x,beta.cuts,s)
|
Arguments
x |
an object of class MethyLumi or a subclass |
beta.cuts |
cutoffs for low and high beta values |
s |
sample number to plot |
Examples
1 2 | data(mldat)
plotSampleIntensities(mldat,s=1)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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