qcplot: Methods for dealing with control data for Illumina...

In seandavi/methylumi: Handle Illumina methylation data

Description

The qcplot function simply generates a plot of the control probe information for a given controlType.

Usage

qcplot(object,controltype,...)
controlTypes(object,...)

Arguments

object	An object of class MethyLumiSet or MethyLumiQC
controltype	A single character value representing the bead type to plot from the quality control data. The available types are accessible via the controlTypes method.
...	passed to plot function

Details

The descriptions of the various control types can be obtained from the Illumina methylation user's guides.

Author(s)

Sean Davis <[e-mail]>

See Also

MethyLumiSet, MethyLumiQC

Examples

data(mldat)
controlTypes(mldat)
qcplot(mldat,controlTypes(mldat)[3])

seandavi/methylumi documentation built on Oct. 28, 2021, 12:42 a.m.