seasoncloud/Alleloscope: Allele-specific copy number genotyping for single cell sequencing data

Alleloscope is a method for allele-specific copy number estimation that can be applied to single cell DNA and ATAC sequencing data (separately or in combination), allowing for integrative multi-omic analysis of allele-specific copy number and chromatin accessibility for the same cell.

Getting started

Package details

AuthorChi-Yun Wu, Nancy Zhang
Bioconductor views Software
MaintainerChi-Yun Wu <chiyunwu@pennmedicine.upenn.edu>
LicenseGPL-2
Version1.0.0
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("remotes")
remotes::install_github("seasoncloud/Alleloscope")
seasoncloud/Alleloscope documentation built on March 25, 2021, 7:52 p.m.