Description Usage Arguments Value

View source: R/genotype_conf.R

Compute confidence scores based on posterior probability for each cell in a region.

1 | ```
genotype_conf(X = NULL, gt = NULL)
``` |

`X:` |
A ncell by 2 dataframe. Column 1: normalized coverage (rho_hat); Column 2: theta_hat |

`gt:` |
A vector of lenth ncell. The numbers represent cell-level allele-specific copy number states. |

A lineage tree plot constructed using cell-level haplotype profiles across all regions.

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