Man pages for serbinsh/biocro
Simulation of Energycane and Sugarcane
| aci | A/Ci curves |
| annualDB | Miscanthus dry biomass data. |
| aq | A/Q curves |
| BioCro-internal | Internal BioCro functions |
| BioGro | Biomass crops growth simulation |
| c3CanA | Simulates canopy assimilation for C3 canopies |
| c3photo | Simulates C3 photosynthesis |
| c4photo | Coupled photosynthesis-stomatal conductance simulation |
| CanA | Simulates canopy assimilation |
| Century | This function implements the Century model from Parton. |
| cmi0506 | Weather data |
| cmiWet | Weather data |
| doy124 | Weather data |
| eC4photo | C4 photosynthesis simulation (von Caemmerer model) |
| eCanA | Simulates canopy assimilation (von Caemmerer model) |
| EngWea94i | Weather data corresponding to a paper by Clive Beale (see... |
| EngWea94rf | Weather data corresponding to a paper by Clive Beale (see... |
| idbp | Initial Dry Biomass Partitioning Coefficients |
| LayET | Weather data |
| lightME | Simulates the light macro environment |
| MCMCBioGro | Simulated Annealing and Markov chain Monte Carlo for... |
| MCMCc4photo | Markov chain Monte Carlo for C4 photosynthesis parameters |
| MCMCEc4photo | Markov chain Monte Carlo for C4 photosynthesis parameters |
| mOpc3photo | Multiple optimization of assimilation (or stomatal... |
| mOpc4photo | Multiple optimization of C4 photosynthesis. |
| obsBea | Miscanthus assimilation field data |
| obsBeaC | Complete Miscanthus assimilation field data |
| obsNaid | Miscanthus assimilation data |
| OpBioGro | Optimization of dry biomass partitioning coefficients. |
| Opc3photo | Optimize parameters of the C3 photosynthesis model. |
| Opc4photo | Optimization of C4 photosynthesis parameters |
| OpEC4photo | Optimization of C4 photosynthesis parameters (von Caemmerer... |
| plotAC | Plotting function for A/Ci curves |
| plot.BioGro | Plotting function for BioGro objects |
| plot.MCMCBioGro | Plotting function fo the MCMCBioGro class |
| plot.MCMCc4photo | Plotting function for MCMCc4photo objects |
| plot.MCMCEc4photo | Plottin function for MCMCEc4photo objects |
| plot.mOpc3photo | Plotting method |
| plot.mOpc4photo | Plotting method |
| predict.Opc3photo | Predict method |
| predict.Opc4photo | Predict method |
| print.MCMCEc4photo | Print an MCMCEc4photo object |
| print.mOpc3photo | Printing method |
| print.mOpc4photo | Printing method |
| print.OpBioGro | Print an OpBioGro object |
| print.Opc3photo | Display methods for Opc4photo and OpEC4photo |
| print.Opc4photo | Display methods for Opc4photo and OpEC4photo |
| print.OpEC4photo | Print an OpEC4photo object |
| Rmiscanmod | RUE-based model to calculate miscanthus growth and yield. |
| RsqC4photo | R-squared for C4 photosynthesis simulation (Collatz model) |
| RsqEC4photo | R-squared for C4 photosynthesis simulation (von Caemmerer... |
| RssBioGro | Residual sum of squares for BioGro. |
| RUEmod | Radiation use efficiency based model |
| RUEmodMY | Radiation use efficiency based model |
| simDat2 | Simulated biomass data. |
| SoilEvapo | Soil Evaporation |
| soilML | soil multi-layered |
| summary.Opc4photo | This function will implement simple calculations of predicted... |
| sunML | Sunlit shaded multi-layer model |
| valid_dbp | Validate dry biomass partitioning coefficients |
| WD1979 | Randomly picked dataset from the Illinois area from 1979 |
| weach | Simulates the hourly conditions from daily |
| weather05 | Weather data |
| weather06 | Weather data |
| wtrstr | Simple function to illustrate soil water content effect on... |
