Man pages for seriph78/COTAN
COexpression Tables ANalysis
| CalculatingCOEX | Calculating the COEX matrix for genes and cells |
| ClustersList | _Clusters_ utilities |
| Conversions | Data class conversions |
| COTAN-class | Definition of the 'COTAN' class |
| COTAN_Legacy | Handle legacy 'scCOTAN'-class and related symmetric matrix... |
| COTAN_ObjectCreation | 'COTAN' shortcuts |
| Datasets | Data-sets |
| GenesStatistics | Calculations of genes statistics |
| getColorsVector | getColorsVector |
| HandleMetaData | Handling _meta-data_ in 'COTAN' objects |
| HandleStrings | Handle names and factors' levels |
| HandlingClusterizations | Handling cells' _clusterization_ and related functions |
| HandlingConditions | Handling cells' _conditions_ and related functions |
| HeatmapPlots | Heatmap Plots |
| Installing_torch | Installing torch R library (on Linux) |
| LoggingFunctions | Logging in the 'COTAN' package |
| MultiThreading | Handling Multi-Core and GPU environments |
| NumericUtilities | Numeric Utilities |
| ParametersEstimations | Estimation of the 'COTAN' model's parameters |
| RawDataCleaning | Raw data cleaning |
| RawDataGetters | Raw data 'COTAN' accessors |
| UniformClusters | Uniform Clusters |
| UniformTranscriptCheckers | Definition of the *Transcript Uniformity Checker* classes |
