API for seshadrilab/flowHelpers
Collection of helper functions for analyzing FCM data
| Global functions | |
|---|---|
| addBooleanGate | Man page Source code |
| boxplot.boolean.subset.proportions | Man page Source code |
| boxplot.cell.counts | Man page Source code |
| boxplot.subset.proportion.stats | Man page Source code |
| boxplotsCompassSubsetBgCorrPropStratified | Man page Source code |
| compass.subset.comparisons | Man page Source code |
| createTsneInputMatrix | Source code |
| cytokine.specific.subset.comparison | Man page Source code |
| extractAndFilterDataForTsne | Source code |
| fs.line.plot | Man page Source code |
| fs.plot | Man page Source code |
| generic.compass.wrapper | Man page Source code |
| getCatsAndSubsetNames | Man page Source code |
| highlight.boolean.subset.flow.plot | Man page Source code |
| lineplot.boolean.subset.proportions | Man page Source code |
| orderHeatmapColumnsByCytokinePresence | Man page Source code |
| prepare.gating.set.list.4.compass | Man page Source code |
| run.compass.once | Man page Source code |
| runOneSense | Man page |
| runTSNE | Man page |
| sampleGatingSetForTsne | Man page Source code |
| swap | Source code |
