createUniProtReferenceTable-functions: Create reference table

Description Usage Arguments Value References See Also

Description

This function creates an UniProt reference table for monoisotopic,MassPeaks-method.

Usage

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  createUniProtReferenceTable(file, organism = 9606,
    keyword = 181, reviewed,
    aminoacids = c("A", "R", "N", "D", "C", "E", "Q", "G", "H", "I", "L", "K", "M", "F", "P", "S", "T", "W", "Y", "V"),
    progressBar = TRUE)

Arguments

file

file path to downloaded table (if missing an automatically download is started).

organism

numeric, organism in UniProt Database.

keyword

numeric, keyword in UniProt Database.

reviewed

logical, if missing both reviewed and non reviewed proteins are downloaded.

Value

data.frame

References

http://www.uniprot.org/

See Also

uniProtTable, averagineTable, createAveragineReferenceTable


sgibb/MALDIquantTools documentation built on May 26, 2017, 6:55 a.m.