associated_genes_with_kegg: Associate genes with KEGG
In shackett/fluxr: Tidying Metabolism
Description
Usage
Arguments
Value
Examples
Description
Find KEGG pathway IDs and names associated with an organisms' genes.
Usage
1
2
associated_genes_with_kegg(organism_code, classification = "module",
genes = NULL)
Arguments
organism_code
a three letter code
classification
type of kegg classification to use: either module or pathway
genes
optional character vector of gene names to return
Value
tibble of KEGG gene names and their corresponding pathway codes and names
Examples
1
associated_genes_with_kegg("sce")
shackett/fluxr documentation built on May 29, 2019, 8:06 p.m.
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Description Usage Arguments Value Examples
Description
Find KEGG pathway IDs and names associated with an organisms' genes.
Usage
1 2 | associated_genes_with_kegg(organism_code, classification = "module",
genes = NULL)
|
Arguments
organism_code |
a three letter code |
classification |
type of kegg classification to use: either module or pathway |
genes |
optional character vector of gene names to return |
Value
tibble of KEGG gene names and their corresponding pathway codes and names
Examples
1 | associated_genes_with_kegg("sce")
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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