associated_genes_with_kegg: Associate genes with KEGG

Description Usage Arguments Value Examples

View source: R/access_databases.R

Description

Find KEGG pathway IDs and names associated with an organisms' genes.

Usage

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associated_genes_with_kegg(organism_code, classification = "module",
  genes = NULL)

Arguments

organism_code

a three letter code

classification

type of kegg classification to use: either module or pathway

genes

optional character vector of gene names to return

Value

tibble of KEGG gene names and their corresponding pathway codes and names

Examples

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shackett/fluxr documentation built on May 26, 2017, 6:59 a.m.