convert_metabolomics_to_wide_output: Convert Metabolomics to Wide Output

Description Usage Arguments Value Examples

Description

Convert normalized metabolomics data to wide-data and save to output.

Usage

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convert_metabolomics_to_wide_output(normalized_data, metabolite_info, output)

Arguments

normalized_data

Normalized metabolomics quantitative data

metabolite_info

Information specific to each measured metabolite

output

Path to output

Value

writes a tsv to output

Examples

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directory = system.file("extdata", "maven_axon.xlsx", package = "fluxr")
maven_data <- read_MAVEN_data(directory)
normalized_data <- normalize_metabolomics(maven_data$metabolomics_data)
metabolite_info <- maven_data$metabolite_info
convert_metabolomics_to_wide_output(output = "fluxr_trial_output.txt")

shackett/fluxr documentation built on May 29, 2019, 8:06 p.m.