combine.baf.files: Combines all separate BAF files per chromosome into a single...

In shaghayeghsoudi/Battenberg_customized: Battenberg subclonal copy number caller

Description

Combines all separate BAF files per chromosome into a single file

Usage

combine.baf.files(inputfile.prefix, inputfile.postfix, outputfile, no.chrs)

Arguments

inputfile.prefix	Prefix of the input files until the chromosome number. The chromosome number will be added internally
inputfile.postfix	Postfix of the input files from the chromosome number
outputfile	Full path to where the output will be written
no.chrs	Number of chromosomes, i.e. the number of files that need to be concatenated

Author(s)

dw9

shaghayeghsoudi/Battenberg_customized documentation built on Feb. 13, 2022, 4:10 a.m.