mask_high_cn_segments: Mask segments that have a too high CN state
In shaghayeghsoudi/Battenberg_customized: Battenberg subclonal copy number caller
Description
Usage
Arguments
Value
Author(s)
View source: R/fitcopynumber.R
Description
Mask segments that have a too high CN state
Usage
1
mask_high_cn_segments(subclones, bafsegmented, max_allowed_state)
Arguments
subclones
Subclones output data
bafsegmented
BAFsegmented data
max_allowed_state
The maximum state allowed before overruling takes place
Value
A list with the masked subclones, bafsegmented and the number of segments masked and their total genome size
Author(s)
sd11
shaghayeghsoudi/Battenberg_customized documentation built on Feb. 13, 2022, 4:10 a.m.
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Description Usage Arguments Value Author(s)
View source: R/fitcopynumber.R
Description
Mask segments that have a too high CN state
Usage
1 | mask_high_cn_segments(subclones, bafsegmented, max_allowed_state)
|
Arguments
subclones |
Subclones output data |
bafsegmented |
BAFsegmented data |
max_allowed_state |
The maximum state allowed before overruling takes place |
Value
A list with the masked subclones, bafsegmented and the number of segments masked and their total genome size
Author(s)
sd11
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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