API for shazanfar/scHOT
single-cell higher order testing
| Global functions | |
|---|---|
| .scHOT | Man page |
| MOB_subset | Man page |
| `params<-` | Source code |
| `positionColData<-` | Source code |
| `positionType<-` | Source code |
| `scHOT_output<-` | Source code |
| `testingScaffold<-` | Source code |
| `weightMatrix<-` | Source code |
| check_validity | Source code |
| estimatePvalues | Source code |
| functionOverScaffoldWithWeights | Source code |
| liver | Man page |
| params<- | Man page |
| plotColouredExpression | Man page Source code |
| plotEgoNetwork | Man page |
| plotHigherOrderSequence | Man page |
| plotOrderedExpression | Man page Source code |
| positionColData<- | Man page |
| positionType<- | Man page |
| scHOT | Man page Source code |
| scHOT-class | Man page |
| scHOT_addTestingScaffold | Man page Source code |
| scHOT_buildFromMatrix | Man page Source code |
| scHOT_buildFromSCE | Man page Source code |
| scHOT_calculateGlobalHigherOrderFunction | Man page Source code |
| scHOT_calculateHigherOrderTestStatistics | Man page Source code |
| scHOT_estimatePvalues | Man page Source code |
| scHOT_output<- | Man page |
| scHOT_performPermutationTest | Man page Source code |
| scHOT_plotPermutationDistributions | Man page |
| scHOT_setPermutationScaffold | Man page Source code |
| scHOT_setWeightMatrix | Man page Source code |
| scHOT_stripOutput | Man page Source code |
| spatialWeightMatrix | Man page Source code |
| stratifiedSample | Source code |
| testingScaffold<- | Man page |
| thin | Man page Source code |
| trajectoryWeightMatrix | Man page Source code |
| weightMatrix<- | Man page |
| weightedFunctionOverScaffold | Source code |
| weightedPearson | Man page Source code |
| weightedSpearman | Man page Source code |
| weightedVariance | Man page Source code |
| weightedZIKendall | Man page Source code |
| weightedZISpearman | Man page Source code |
