Man pages for shbrief/RunTerraWorkflow
Run workflows implemented in Terra/AnVIL workspace
| AnVILBrowse | Search AnVIL workspaces using keywords |
| availableAnalysis | Find the available analysis |
| cloneWorkspace | Clone template workspace |
| currentInput | Check the current input arguments |
| dot-biobakery_currentInput | Check the current input arguments |
| dot-getAgeMinMax | Apply to the returned value from '.avSampleData' function |
| dot-get_workflow_fullname | Get the workflow namespace and name |
| dot-get_workspace_fullname | Get the fullname of the workspace |
| dot-nonMetadataOutputs | Subset to non-metadata output files |
| dot-search_keyword | Search keywords in a given metadata table |
| dot-stop_quietly | Stop the execution without error messages |
| dot-tableToString | Summary table into a single string where the column name and... |
| findInputName | Find the root entity name |
| getAllDataTables | Get all the data tables |
| getAllWorkflows | Collect workflows from all workspaces a user has access to |
| getAllWorkspaces | Get AnVIL workspaces |
| getDashboard | Print out Dashboard contents |
| getData | Creates a metadata table of data from all workspaces provided |
| getOutput | Download output files from Terra |
| getWorkflowConfig | Check the workflow configuration |
| getWorkflows | Creates a metadata table of workflows from all workspaces... |
| getWorkspaces | Creates a metadata table of all workspaces |
| monitorWorkflow | Check the status of submitted jobs |
| runWorkflow | Launch Terra workflow |
| setCloudEnv | Setup Google Cloud Account and Project |
| stopWorkflow | Abort submitted job |
| updateInput | Update the input |
