Files in sheng-liu/smt

Single Molecule Tracking

CHANGELOG.md

DESCRIPTION

GUIDES/smt Pipeline.png

GUIDES/smt Pipeline.pptx

GUIDES/trackll-Manipulation-Guide.Rmd

GUIDES/trackll-Manipulation-Guide.html

GUIDES/trackll-Manipulation-Guide.pdf

NAMESPACE

R/Dcoef.Helpers.R R/Dcoef.R R/DisplacementCDF.R R/Plotting.Helpers.R R/compareFolder.R R/createTrackll.R R/dwellTime.R R/exportTrackll.R R/filterTrack.R R/fitCDF.R R/fitNormDistr.R R/helperFunctions.R R/linkSkippedFrames.R R/msd.R R/plotTrack.R R/preference.R R/readDiaSessions.R R/readDiatrack.R R/readParticleTracker.R R/readSlimFast.R R/selComponentTracks.R R/smt.R R/squareDisp.R

build/.Rapp.history

build/vignette.rds

inst/cpp/squareDispRcpp.cpp

inst/doc/smt-vignette.R inst/doc/smt-vignette.Rmd

inst/doc/smt-vignette.html

inst/doc/smt-vignette.pdf

inst/extdata/.DS_Store

inst/extdata/HTZ1/HTZ1_140mW_WT.txt

inst/extdata/INDEX/IndexFile.csv

inst/extdata/INDEX/componentTrackID-SWR1.comp.1.csv

inst/extdata/INDEX/componentTrackID-SWR1.comp.2.csv

inst/extdata/INDEX/indexFile.csv

inst/extdata/INDEX/indexFile2.csv

inst/extdata/ImageJ/epl11AA_HTZ1Halo_No_RAP_fr10ms_120mW_1.tif.csv

inst/extdata/ImageJ/epl11AA_HTZ1Halo_No_RAP_fr10ms_120mW_1_MASK.tif

inst/extdata/ImageJ/epl11AA_HTZ1Halo_No_RAP_fr10ms_120mW_1_Nuclei.tif

inst/extdata/ImageJ/epl11AA_HTZ1Halo_No_RAP_fr10ms_120mW_2.tif.csv

inst/extdata/ImageJ/epl11AA_HTZ1Halo_No_RAP_fr10ms_120mW_2_MASK.tif

inst/extdata/ImageJ/epl11AA_HTZ1Halo_No_RAP_fr10ms_120mW_2_Nuclei.tif

inst/extdata/PREF/profile.csv

inst/extdata/SWR1/SWR1_WT_140mW_image6.txt

inst/extdata/SWR1/SWR1_WT_140mW_image6_MASK.tif

inst/extdata/SWR1/SWR1_WT_140mW_image6_Nuclei.tif

inst/extdata/SWR1_2/SWR1_WT_140mW_image6.txt

inst/extdata/SWR1_2/SWR1_WT_140mW_image6_MASK.tif

inst/extdata/SWR1_2/SWR1_WT_140mW_image6_Nuclei.tif

inst/extdata/SWR1_2/SWR1_WT_140mW_image7.txt

inst/extdata/SWR1_2/SWR1_WT_140mW_image7_MASK.tif

inst/extdata/SWR1_2/SWR1_WT_140mW_image7_Nuclei.tif

man/Dcoef-methods.Rd man/compareFolder-methods.Rd man/createTrackll-methods.Rd man/displacementCDF-methods.Rd man/dwellTime-methods.Rd man/exportTrackll-methods.Rd man/filterTrack-methods.Rd man/fitCDF-methods.Rd man/fitNormDistr-methods.Rd man/linkSkippedFrames-methods.Rd man/msd-methods.Rd man/plotTrack-methods.Rd man/readDiaSessions-methods.Rd man/readDiatrack-methods.Rd man/readParticleTracker-methods.Rd man/readSlimFast-methods.Rd man/selComponentTracks-methods.Rd man/smt.Rd

smt.Rproj

vignettes/smt-vignette.Rmd

sheng-liu/smt documentation built on May 29, 2019, 9:22 p.m.