RetriveMetaDataFromPmidsBatch: RetriveMetaDataFromPmidsBatch

In shihikoo/pubmedTools: Tools for retriving information from PubMed database

Description

this function is good for retrive data directly

Usage

RetriveMetaDataFromPmidsBatch(
  pmids,
  outputFileBaseName = "",
  columns = "",
  grid = 500
)

Arguments

pmids	a string of character. PubMed central Id
outputFileBaseName	a string of characters. The base name of output xml files. If default, there will be no xml saved.
columns	a list of string of requested column names: "pmid","pmcid", "journal", "journalCountry","publicationYear","funders","authors","affiliations","title","abstract","isbn","volume","issue","pages", "keywords","doi"
grid	the number of ids to run in each loop

Value

a nx7 data frame. With three columns: pmcid, pmid, doi

Examples

RetriveMetaDataFromPmidsBatch(c("28852052", "29041955"))

shihikoo/pubmedTools documentation built on June 19, 2021, 9:56 a.m.