RetriveMetaDataFromPubmedEfetchParallel: RetriveMetaDataFromPubmedEfetchParallel

In shihikoo/pubmedTools: Tools for retriving information from PubMed database

Description

Good for used in local multiple xmls

Usage

RetriveMetaDataFromPubmedEfetchParallel(files, columns = "")

Arguments

files	a list of string. A list of xml filenames
columns	a list of string of requested column names: "pmid","pmcid", "journal", "journalCountry","publicationYear","funders","authors","affiliations","title","abstract","isbn","volume","issue","pages", "keywords","doi"

Value

a list of metaDatarmation retrived from PubMed

Examples

baselink <- "https://eutils.ncbi.nlm.nih.gov/entrez/eutils/efetch.fcgi"
link <- paste0(baselink, "?db=pubmed&id=20704052&retmode=xml")
RetriveMetaDataFromPubmedEfetchParallel(link)

shihikoo/pubmedTools documentation built on June 19, 2021, 9:56 a.m.