lnb: lnb

In shimlab/riboHMM2: Analysis tool for Ribo-seq

Description

lnb returns the log likelihood f(x), where x ~ Nb(alpha, beta/(E+beta) )

Usage

lnb(x, alpha, beta, E)

Arguments

x	a scalar. A realization from negative binomial distribution.
alpha	shape parameter in gamma distribution
beta	rate parameter in gamma distribution
E	a scalar. Normalizing constant for the observed chain x.

Value

Log likelihood f(x)

Examples

x <- 50
alpha <- 1
beta <- 0.1
E <- 10
lnb(x, alpha, beta, E)

shimlab/riboHMM2 documentation built on May 19, 2019, 6:23 p.m.