ct_y_axis: Set up y axis in a conc-time plot

In shirewoman2/Consultancy: Standardized tools for using R within the Simcyp Consultancy Team

Set up y axis in a conc-time plot

Description

This function is specifically for setting options for the y axis in a concentration-time graph and is NOT meant to be called on its own.

Usage

ct_y_axis(
  ADAMorAdvBrain,
  Tissue_subtype,
  EnzPlot,
  y_axis_limits_lin,
  time_range,
  y_axis_interval = NA,
  prettify_compound_names = TRUE,
  normalize_by_dose = FALSE,
  y_axis_limits_log,
  Ylim_data,
  pad_y_axis,
  time_range_relative
)

Arguments

ADAMorAdvBrain	T or F for whether ADAM or advanced brain model used
Tissue_subtype	which ADAM-model or advanced-brain-model subsection the data include
EnzPlot	T or F for whether this was a plot of enzyme abundance
y_axis_limits_lin	user input for y axis limits for a linear plot
time_range	user-specified time range
y_axis_interval	user input for y axis tick-mark interval
prettify_compound_names	prettify?
normalize_by_dose	T or F for whether to normalize concs by dose
y_axis_limits_log	user input for y axis limits for a semi-log plot
Ylim_data	data used for determining y axis limits
pad_y_axis	user-specified value for pad_y_axis
time_range_relative	relative time range

Value

values to use for ct_plots

shirewoman2/Consultancy documentation built on Feb. 18, 2025, 10 p.m.