Man pages for shokoohi/DMCHMM
Differentially Methylated CpG using Hidden Markov Model
| BSData-class | BSData object |
| BSDMCs-class | BSDMCs object |
| cBSData-method | cBSData method |
| cBSDMCs-method | cBSDMCs method |
| combine-method | combine method |
| data | data |
| DMCHMM-package | Differentially Methylated CpG using Hidden Markov Model |
| findDMCs-method | findDMCs method |
| manhattanDMCs-method | manhattanDMCs method |
| methHMEM-method | methHMEM method |
| methHMMCMC-method | methHMMCMC method |
| methLevels-method | methLevels method |
| methReads-method | methReads method |
| methStates-method | methStates method |
| methVars-method | methVars method |
| params | params |
| qqDMCs-method | qqDMCs method |
| readBismark-method | readBismark method |
| totalReads-method | totalReads method |
| writeBED-method | writeBED method |
