Description Usage Arguments Examples
query Footprint data from mongodb
1 | getMongoRangeFp(mychr, mystart, myend, mycoll, mydb)
|
mychr |
chromosome |
mystart |
start position |
myend |
end position |
mycoll |
collection name in mongodb |
mydb |
database name in mongodb |
1 2 3 4 5 6 7 8 9 10 | ## Not run:
mychrGo="chr17"
mystartGo=41196312-500*1000
myendGo=41322262+500*1000
mycollGo="CD19_DS17186_hg19_FP"
mydbGo="txregnet"
res_fp=getMongoRangeFp(mychrGo,mystartGo,myendGo,mycollGo,mydbGo)
res_fp
## End(Not run)
|
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