simingz/ctwas: Adjusting for genetic confounders in transcriptome-wide association studies improves discovery of risk genes of complex traits

This package implements the causal-TWAS (cTWAS) method we developed to identify causal genes in GWAS. It is a generalization of Transcriptome-wide association studies (TWAS), but when analyzing any gene, it adjusts for other nearby genes and all nearby genetic variants.

Getting started

Package details

Maintainer
LicenseMIT + file LICENCE
Version0.1.38
URL https://github.com/xinhe-lab/ctwas
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("remotes")
remotes::install_github("simingz/ctwas")
simingz/ctwas documentation built on Sept. 17, 2024, 10:55 p.m.