prep_pvar: Prepare .pvar file
In simingz/ctwas: Adjusting for genetic confounders in transcriptome-wide association studies improves discovery of risk genes of complex traits
View source: R/ctwas_read_data.R
prep_pvar R Documentation
Prepare .pvar file
Description
Prepare .pvar file
Usage
prep_pvar(pgenf, outputdir = getwd())
Arguments
pgenf
pgen file
.pvar file format: https://www.cog-genomics.org/plink/2.0/formats#pvar
outputdir
a string, the directory to store output
Value
corresponding pvar file
simingz/ctwas documentation built on Sept. 17, 2024, 10:55 p.m.
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View source: R/ctwas_read_data.R
| prep_pvar | R Documentation |
Prepare .pvar file
Description
Prepare .pvar file
Usage
prep_pvar(pgenf, outputdir = getwd())
Arguments
pgenf |
pgen file .pvar file format: https://www.cog-genomics.org/plink/2.0/formats#pvar |
outputdir |
a string, the directory to store output |
Value
corresponding pvar file
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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