initialize-mcmcoutputpermpost-method: Initializer of the 'mcmcoutputpermpost' class

In simonsays1980/finmix: An R package for Bayesian estimation of finite mixture distributions

Description

Only used implicitly. The initializer stores the data into the slots of the passed-in object.

Usage

## S4 method for signature 'mcmcoutputpermpost'
initialize(
  .Object,
  mcmcoutput,
  Mperm = integer(),
  parperm = list(),
  relabel = character(),
  weightperm = array(),
  logperm = list(),
  postperm = list(),
  entropyperm = array(),
  STperm = array(),
  Sperm = array(),
  NKperm = array()
)

Arguments

.Object	An object: see the "initialize Methods" section in initialize.
mcmcoutput	An mcmcoutput class containing the results from MCMC sampling.
Mperm	An integer defining the number of permuted MCMC samples.
parperm	A named list containing the permuted component parameter samples from MCMC sampling
relabel	A character specifying the relabeling algorithm used for permuting the MCMC samples.
weightperm	An array of dimension Mperm x K containing the relabeled weight parameters.
logperm	A named list containing the mixture log-likelihood, the prior log-likelihood, and the complete data posterior log-likelihood for the permuted MCMC samples.
postperm	A named list containing a named list par with array(s) of parameters from the posterior density.
entropyperm	An array of dimension Mperm x 1 containing the entropy for each MCMC permuted draw.
STperm	An array of dimension Mperm x 1 containing all permuted MCMC states, for the last observation in slot @y of the fdata object passed in to mixturemcmc() where a state is defined for non-Markov models as the last indicator of this observation.
NKperm	An array of dimension Mperm x K containing the numbers of observations assigned to each component.
An	array of dimension N x storeS containing the last storeS permuted indicators. storeS is defined in the slot @storeS of the mcmc object passed into mixturemcmc().

See Also

• Classes_Details for details of class definitions, and

• setOldClass for the relation to S3 classes

simonsays1980/finmix documentation built on Dec. 23, 2021, 2:25 a.m.