Calculates the effective number of tests performed in a GWAS, given the LD structure among the SNPs. SNPs that are highly correlated are not counted twice.
matrix, either individual by SNPs (n x p) matrix, or correlation matrix between SNPs
indicates if option mat is a correlation matrix or not
zhc.correction number of effective tests
Implemented from https://www.ncbi.nlm.nih.gov/pubmed/18271029
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