pandaxBoot: Caculate differential regulatory network statistics
In singha53/amritr: Accessory Functions Used by Amrit Singh
Description
Caculate differential regulatory network statistics
Usage
1
pandaxBoot(motif, geneExp, regExp, phenotype, nperms, threads)
Arguments
motif
3 column matrix, 1st column (regVar), 2nd column (gene), 3rd (weight)
geneExp
nxp matrix (gene by sample)
phenotype
factor specifiying the group of each sample
nperms
# of permutations
regulatory
expression (regVar by sample)
singha53/amritr documentation built on July 21, 2019, 3:46 p.m.
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Description
Caculate differential regulatory network statistics
Usage
1 | pandaxBoot(motif, geneExp, regExp, phenotype, nperms, threads)
|
Arguments
motif |
3 column matrix, 1st column (regVar), 2nd column (gene), 3rd (weight) |
geneExp |
nxp matrix (gene by sample) |
phenotype |
factor specifiying the group of each sample |
nperms |
# of permutations |
regulatory |
expression (regVar by sample) |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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