pruneSpecies: Removes species with abundance below a threshold
In sizespectrum/mizerExperimental: Extends the mizer package with experimental features
View source: R/manipulateParams.R
pruneSpecies R Documentation
Removes species with abundance below a threshold
Description
![[Experimental]](../help/figures/lifecycle-experimental.svg)
This function simply removes the low-abundance species from the params object.
It does not recalculate the steady state for the remaining species or
retune their reproductive efficiencies.
Usage
pruneSpecies(params, cutoff = 0.001)
Arguments
params
A MizerParams object
cutoff
Species with an abundance at maturity size that is less than
cutoff times community abundance will be removed. Default 1e-3.
Value
An object of type MizerParams
sizespectrum/mizerExperimental documentation built on April 16, 2024, 8:39 a.m.
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View source: R/manipulateParams.R
| pruneSpecies | R Documentation |
Removes species with abundance below a threshold
Description
This function simply removes the low-abundance species from the params object.
It does not recalculate the steady state for the remaining species or
retune their reproductive efficiencies.
Usage
pruneSpecies(params, cutoff = 0.001)
Arguments
params |
A MizerParams object |
cutoff |
Species with an abundance at maturity size that is less than cutoff times community abundance will be removed. Default 1e-3. |
Value
An object of type MizerParams
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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