|addSignature||Add new signature(s) to an existing set of mutation...|
|caseControlSig||Identify signatures with significantly higher mutation burden...|
|clusterSignature||Hierarchical clustering of mutational signature.|
|confidenceSig||Provides interval of uncertainty for estimated weights of...|
|contextSNV||Partition mutations according to their genomic contexts|
|deleteSignature||Delete selected signatures from an existing set of mutation...|
|enrichSig||Identify enrichment for signatures in individual samples...|
|mergeSignature||Creates a new mutational signature by taking a linear...|
|persistSig||Mutation signatures in different allele frequency spectrum|
|processSNV||Estimate mutation frequency in tri-nucleotide motif contexts.|
|renameSignature||Rename selected signatures from an existing set of...|
|signatureHeatmap||Create a heatmap of motif weights for signatures.|
|signaturePCA||Create three PCA plots for signatures.|
|vcfToSNV||Convert vcf file to snv dataframe|
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