signature_tSNE: Create tSNE plot of signatures.
In sjdlabgroup/MutSigTools: Mutational signature analysis
Description
Usage
Arguments
Value
See Also
Examples
View source: R/signature_tSNE.R
Description
Constructs tSNE plots of signatures.
Usage
1
signature_tSNE(sigmat, pngfile )
Arguments
sigmat
An object of class mutsig describing a set of signatures.
pngfile
name of png formatted image file to be created
Value
Create tSNE plot to show similarity among mutational signatures.
-
*_tSNE.png The tSNE plot of mutation signatures.
See Also
signatureHeatmap, signaturePCA, signatures.cosmic, deleteSignature, renameSignature and mergeSignature.
Examples
1
2
sigmat=signatures.cosmic
signature_tSNE(sigmat, pngfile="signature_tSNE")
sjdlabgroup/MutSigTools documentation built on Oct. 5, 2019, 3:31 a.m.
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Description Usage Arguments Value See Also Examples
View source: R/signature_tSNE.R
Description
Constructs tSNE plots of signatures.
Usage
1 | signature_tSNE(sigmat, pngfile )
|
Arguments
sigmat |
An object of class mutsig describing a set of signatures. |
pngfile |
name of png formatted image file to be created |
Value
Create tSNE plot to show similarity among mutational signatures.
-
*_tSNE.png The tSNE plot of mutation signatures.
See Also
signatureHeatmap, signaturePCA, signatures.cosmic, deleteSignature, renameSignature and mergeSignature.
Examples
1 2 | sigmat=signatures.cosmic
signature_tSNE(sigmat, pngfile="signature_tSNE")
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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