county_risk_data: County Risk spreadsheet
In sjfox/rtZIKVrisk: Accompanies: "Real-time risk assessment for Zika in the United States"

Data for importation/transmission risk for all counties

1	county_risk_data

A dataframe with 254 rows and 24 variables:

Metro: Metro area that county is associated with (integer)-not used
id: Texas County ID
Geography: County name format 'county_name "County, Texas"'
GDP: County GDP
importation_probability: Probability that next imported case occurs in that county
importation.current: Importation rate Quarter 1 for county
importation.projected: Projected county importation rate for Quarter 3
importation.worse.projected: Worst case county importation projection for Q3
mosquito.abundance: Mosquito abundance for county from Kraemer 2015 global distribution data
rnott.expected.round: Expected august r0 for county
low.round: Low GDP effect r0 for august
high.round: High GDP effect r0 for august
hetero.round: Heterogeneous GDP effect for r0 for august
temperature: Historic average county temperature for August
eip: Extrinsic incubation period for mosquitoes at average temperature

...

Zika epidemic simulations with R0=1.1 or high risk group, intro rate = 0.01 or high risk group

sjfox/rtZIKVrisk documentation built on May 30, 2019, 12:04 a.m.

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