freq_above_thresh_vec: Vectorizes the freq_above_thresh for the number of detected

In sjfox/rtZIKVrisk: Accompanies: "Real-time risk assessment for Zika in the United States"

Description

Called from the get_epidemic_prob_by_d

Usage

freq_above_thresh_vec(df, detected, cum_threshold, prev_threshold,
  num_necessary)

Arguments

df	dataframe formatted output from get_cumcases_by_detects_all. Has one columns for detected, cum_infections, and max_prevalence.
detected	vector of detected of interest
cum_threshold	cumulative threhold for epidemic classification
prev_threshold	prevalence threshold for epidemic classification
num_necessary	number of trials necessary for epi classification usually 1% of trials.

Value

A vector of epidemic probs for the given detected values.

sjfox/rtZIKVrisk documentation built on May 30, 2019, 12:04 a.m.