Files in sjfox/rtZIKVrisk
Accompanies: "Real-time risk assessment for Zika in the United States"
.Rbuildignore
.gitignore
DESCRIPTION
NAMESPACE
R/data.R
R/figure_fxns.R
R/outbreak_analysis_fxns.R
R/plotting_fxns.R
R/sim_zika_outbreaks.R
README.md
data/county_epi_prob_by_d.rda
data/county_plot.m.rda
data/county_prob_detect_x.rda
data/county_risk_data.rda
data/dying_arrows.rda
data/epi_prob_by_reported_data.rda
data/ex_dying_epidemic_data.rda
data/ex_growing_epidemic_data.rda
data/ex_outbreak_sims.rda
data/exp_triggers_data.rda
data/growing_arrows.rda
data/major_city_loc.rda
data/prev_by_reported_data.rda
data/texas_county_shp.rda
inst/doc/introduction.html
man/all_max_cum_infect.Rd
man/county_epi_prob_by_d.Rd
man/county_prob_detect_x.Rd
man/county_risk_data.Rd
man/cum_detect_local.Rd
man/cumcases_by_detects.Rd
man/dying_arrows.Rd
man/epi_prob_by_reported_data.Rd
man/ex_dying_epidemic_data.Rd
man/ex_growing_epidemic_data.Rd
man/ex_outbreak_sims.Rd
man/exp_triggers_data.Rd
man/freq_above_thresh.Rd
man/freq_above_thresh_vec.Rd
man/get_county_parms.Rd
man/get_cumcases_by_detects_all.Rd
man/get_epidemic_prob_by_d.Rd
man/growing_arrows.Rd
man/last_cuminfect_local.Rd
man/major_city_loc.Rd
man/max_local_prev.Rd
man/plot_epi_prob.Rd
man/plot_fig1.Rd
man/plot_fig2.Rd
man/plot_fig3.Rd
man/plot_fig4.Rd
man/plot_final_sizes.Rd
man/plot_zika_outbreaks.Rd
man/prev_by_reported_data.Rd
man/run_n_zika_sims.Rd
man/run_zika_sim.Rd
man/texas_county_shp.Rd
man/track_infectious.Rd
man/update_state.Rd
man/update_states.Rd
man/zika_def_parms.Rd
rtZIKVrisk.Rproj
vignettes/introduction.Rmd
