Description Usage Arguments Value
Sample and summarize a tree for given generation sizes
1  | sample_i(perm_mat, x)
 | 
perm_mat | 
 g x B matrix where each column is a unique permutation of generation sizes  | 
x | 
 number of smear positives  | 
matrix of two columns of dimension Bx2 where the first column is the number of i positive transmissions in the cluster and the second is i negative
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