Files in skimlab/CCSBUtils

R Utilitiy Functions for CCSB

R/ComplexHeatmap_utils.R R/GSEA.R R/classifier_model_summary.R R/classifier_train.R R/classifier_visualization.R R/counts_to_TPM.R R/projections.R R/quantize.R R/utils.R README.md man/classification_summary_workflow.Rd man/combine.predicted.list.Rd man/combine_batches.Rd man/combine_batches_dfs.Rd man/compute_difference.Rd man/compute_pca.Rd man/compute_tsne.Rd man/compute_umap.Rd man/construct_feature_heatmaps.Rd man/construct_feature_maps.Rd man/counts_to_cpm.Rd man/counts_to_tpm.Rd man/cv_loop_train.Rd man/cv_loop_train_iter.Rd man/cv_loop_train_parallel.Rd man/cv_train_final.Rd man/extract_metrics.Rd man/feature_boxplots.Rd man/filter_features.Rd man/filter_features_AUC.Rd man/flatten.predict.multiclass.Rd man/flatten.predict.multilayer.Rd man/get.subsamples.Rd man/get_selected_features.Rd man/ggplot_train_trajectory.Rd man/gtf_to_gene_length.Rd man/heatmap_features_cor.Rd man/heatmap_glmnet.Rd man/heatmap_prediction.Rd man/models_performance_summary.Rd man/mult_wilcox_test.Rd man/plot_projection.Rd man/predict.consensus.Rd man/predict.consensus.multiclass.Rd man/predict.consensus.subclass.Rd man/predict.consensus.type.Rd man/predict.multiClass.Rd man/predict.multilayer.Rd man/predict.type.Rd man/predict.type.multiclass.Rd man/predict.type.subclass.Rd man/prediction_consensus_summary.Rd man/prediction_summary.Rd man/prediction_tables.Rd man/quantize_robust_zscore.Rd man/read_gmt.Rd man/robust_zscore.Rd man/save.PDF.Heatmap.Rd man/size.Heatmap.Rd man/split_se.Rd man/train_cv_model_glmnet.Rd man/train_to_final_model.Rd